## Summary
Removed irrelevant stages from the ransomware script application
## Test process
no big changes, so existing tests were used. only a minor change in test, which no longer applies
## Checklist
- [X] PR is linked to a **work item**
- [X] **acceptance criteria** of linked ticket are met
- [X] performed **self-review** of the code
- [ ] written **tests** for any new functionality added with this PR
- [ ] updated the **documentation** if this PR changes or adds functionality
- [ ] written/updated **design docs** if this PR implements new functionality
- [ ] updated the **change log**
- [X] ran **pre-commit** checks for code style
- [ ] attended to any **TO-DOs** left in the code
#2610: removed tap logic from ransomware script
Related work items: #2610
- Merge branch 'feature/2588-minimal-deps' into bugfix/2626-too-many-open-files
- #2626 fix too many open files bug
- Merge remote-tracking branch 'origin/dev' into bugfix/reward-logging
- fix reward logging
- Merge remote-tracking branch 'origin/dev' into bugfix/reward-logging
- get ray to stop crashing
- Merged PR 394: Fix 'too many open files'
- Merged PR 395: Fix reward logging and get ray to stop complaining
- Fix firewall diagram
Related work items: #2588, #2626
## Summary
Change the agent history log to also spit out rewards correctly.
Make ray adhere to new ray API
## Test process
Unit test pass
All notebooks run without crash
## Checklist
- [ ] PR is linked to a **work item**
- [ ] **acceptance criteria** of linked ticket are met
- [x] performed **self-review** of the code
- [ ] written **tests** for any new functionality added with this PR
- [ ] updated the **documentation** if this PR changes or adds functionality
- [ ] written/updated **design docs** if this PR implements new functionality
- [ ] updated the **change log**
- [x] ran **pre-commit** checks for code style
- [x] attended to any **TO-DOs** left in the code
## Summary
Add a method to PCAP to clear file handlers. Invoke this method while resetting environment.
## Test process
no longer crashes on windows when i run too many episodes
## Checklist
- [x] PR is linked to a **work item**
- [x] **acceptance criteria** of linked ticket are met
- [x] performed **self-review** of the code
- [n] written **tests** for any new functionality added with this PR
- [n] updated the **documentation** if this PR changes or adds functionality
- [n] written/updated **design docs** if this PR implements new functionality
- [n] updated the **change log**
- [x] ran **pre-commit** checks for code style
- [x] attended to any **TO-DOs** left in the code
Related work items: #2588, #2626
## Summary
Make it optional to install ray, sb3, and their dependencies.
## Test process
pytest and notebooks
## Checklist
- [ ] PR is linked to a **work item**
- [ ] **acceptance criteria** of linked ticket are met
- [ ] performed **self-review** of the code
- [ ] written **tests** for any new functionality added with this PR
- [ ] updated the **documentation** if this PR changes or adds functionality
- [ ] written/updated **design docs** if this PR implements new functionality
- [ ] updated the **change log**
- [ ] ran **pre-commit** checks for code style
- [ ] attended to any **TO-DOs** left in the code
#2588 optional RL deps
Related work items: #2588
Feedback Issues left:
1.Issues with red-agent image not embeded correctly in data_manipulation_e2e notebook
2._autosummary/tests.unit_tests.html is still completely blank.
3. _index.html is not updated with new 2-pager
4. _dependencies is not updated to just include tier-1 and primary for v3.
5. definiton of user_app_home is not confirmed
## Summary
*Replace this text with an explanation of what the changes are and how you implemented them. Can this impact any other parts of the codebase that we should keep in mind?*
## Test process
*How have you tested this (if applicable)?*
## Checklist
- [X] PR is linked to a **work item**
- [X] **acceptance criteria** of linked ticket are met
- [X] performed **self-review** of the code
- [X] written **tests** for any new functionality added with this PR
- [ ] updated the **documentation** if this PR changes or adds functionality
- [ ] written/updated **design docs** if this PR implements new functionality
- [ ] updated the **change log**
- [X] ran **pre-commit** checks for code style
- [ ] attended to any **TO-DOs** left in the code
#2563: notebook explaining how to get simulation information from PrimAITE
Related work items: #2563
## Summary
This PR removes the hardcoding of Link bandwidth, and makes it possible to be configured via the network yaml definitions.
Link bandwidth will still default to 100 if this is not present, to prevent breaking all previous defined networks.
## Test process
All tests continue to pass.
`basic_network_config.yaml` now provides a non-default link bandwidth which is confirmed within unit tests.
## Checklist
- [X] PR is linked to a **work item**
- [X] **acceptance criteria** of linked ticket are met
- [X] performed **self-review** of the code
- [X] written **tests** for any new functionality added with this PR
- [X] updated the **documentation** if this PR changes or adds functionality
- [ ] written/updated **design docs** if this PR implements new functionality
- [] updated the **change log**
- [X] ran **pre-commit** checks for code style
- [X] attended to any **TO-DOs** left in the code
Related work items: #2457
## Summary
Some minor changes to the network_simulator_demo jupyter notebook so that all cells run.
I've updated the notebook to use a **very lightly** modified version of the ARCD UC2 network that it has been using.
_I've added a single route into the router_1 route table so that `network.get_node_by_hostname("router_1").route_table.show()` returns something visible. I didn't want to have this within the 'normal' uc2 network. Don't @ me._
Corrected a path typo in `basic_lan_network_example()` so it correctly loads that network config.
## Test process
I've not broken any existing tests, and the notebook now runs with fully populated cells.
## Checklist
- [X] PR is linked to a **work item**
- [X] **acceptance criteria** of linked ticket are met
- [X] performed **self-review** of the code
- [X] written **tests** for any new functionality added with this PR
- [X] updated the **documentation** if this PR changes or adds functionality
- [X] written/updated **design docs** if this PR implements new functionality
- [X] updated the **change log**
- [X] ran **pre-commit** checks for code style
- [X] attended to any **TO-DOs** left in the code
Related work items: #2560
## Summary
Added requests in file system that allows:
- file to be created
- folder to be created
- file to be "accessed"
## Test process
https://dev.azure.com/ma-dev-uk/PrimAITE/_git/PrimAITE/pullrequest/378?_a=files&path=/tests/integration_tests/test_simulation/test_request_response.py
## Checklist
- [X] PR is linked to a **work item**
- [X] **acceptance criteria** of linked ticket are met
- [X] performed **self-review** of the code
- [X] written **tests** for any new functionality added with this PR
- [ ] updated the **documentation** if this PR changes or adds functionality
- [ ] written/updated **design docs** if this PR implements new functionality
- [ ] updated the **change log**
- [X] ran **pre-commit** checks for code style
- [ ] attended to any **TO-DOs** left in the code
Related work items: #2606
## Summary
- Set the DatabaseServer service to automatically install the upon install to enable backup. Added some defensive statements that gracefully handle backup/restore requests when FTPClient is not installed.
## Test process
Added test that installs `DatabaseServer` on a new node then checks for an installed `FTPClient`.
## Checklist
- [ ] PR is linked to a **work item**
- [ ] **acceptance criteria** of linked ticket are met
- [ ] performed **self-review** of the code
- [ ] written **tests** for any new functionality added with this PR
- [ ] updated the **documentation** if this PR changes or adds functionality
- [ ] written/updated **design docs** if this PR implements new functionality
- [ ] updated the **change log**
- [ ] ran **pre-commit** checks for code style
- [ ] attended to any **TO-DOs** left in the code
#2561 - Set the DatabaseServer service to automatically install the upon install to enable backup. Added some defensive statements that gracefully handle backup/restore requests when FTPClient is not
Related work items: #2561, #2570
## Summary
Integrating the notebooks into the primaite sphinx socumentation
## Test process
*How have you tested this (if applicable)?*
## Checklist
- [X] PR is linked to a **work item**
- [X] **acceptance criteria** of linked ticket are met
- [X] performed **self-review** of the code
- [ ] written **tests** for any new functionality added with this PR
- [X] updated the **documentation** if this PR changes or adds functionality
- [ ] written/updated **design docs** if this PR implements new functionality
- [ ] updated the **change log**
- [X] ran **pre-commit** checks for code style
- [ ] attended to any **TO-DOs** left in the code
Related work items: #2472
