9b0e24c27b
## Summary - Created app dirs and set as constants in the top-level init. - Renamed _config_values_main to training_config.py and renamed the ConfigValuesMain class to TrainingConfig. - Moved training_config.py to src/primaite/config/training_config.py - Renamed all training config yaml file keys to make creating an instance of TrainingConfig easier. - Moved action_type and num_steps over to the training config. - Decoupled the training config and lay down config. - Refactored main.py so that it can be ran from CLI and can take a training config path and a lay down config path. - Refactored all outputs so that they save to the session dir. - Added some necessary setup scripts that handle creating app dirs, fronting example config files to the user, fronting demo notebooks to the user, performing clean-up in between installations etc. - Added functions that attempt to retrieve the file path of users example config files that have been fronted by the primaite setup. - Added logging config and a getLogger function in the top-level init. - Refactored all logs entries logged to use a logger using the primaite logging config. - Added basic typer CLI for doing things like setup, viewing logs, viewing primaite version, running a basic session. - Updated test to use new features and config structures. - Made tests log to temp directory - typer==0.9.0 added to pyproject.toml - Refactored documentation and included APi docs, dependencies. - Make files now re-build autosummary and deps file. - Added typer and platformdirs to deps in pyproject.toml. - Made root_is_pure = True in setup.py as platform/python specific wheels don't need to be built but the option is there should we need to. ## Test process - Added an e2e test for primaite.main.run func. - Added legacy config file conversion tests - added ## Checklist - [X] This PR is linked to a **work item** - [X] I have performed **self-review** of the code - [X] I have written **tests** for any new functionality added with this PR - [X] I have updated the **documentation** if this PR changes or adds functionality - [X] I have run **pre-commit** checks for code style Related work items: #915