## Summary
**Changed:**
- Copying a file via FTP also copies its health status
- The database automatically attempts to make a backup on step 1
- make the db file a property that is fetched by name from the file system instead of a handle to a file (bruh)
- fixed ftp server re-sending requests back to the client
- fix issue where links with >100% bandwidth cause the observation space to crash
- fix issue where starting a node didn't start services. (not sure how that one passed tests previously)
**To align with Yak:**
- database service removed from uc2 observation space
- sql attack affects the file health status instead of the service
- when the web server fails to fetch data, it goes into compromised state until a successful data fetch
## Test process
Notebooks
## Checklist
- [x] PR is linked to a **work item**
- [x] **acceptance criteria** of linked ticket are met
- [x] performed **self-review** of the code
- [ ] written **tests** for any new functionality added with this PR
- [ ] updated the **documentation** if this PR changes or adds functionality
- [ ] written/updated **design docs** if this PR implements new functionality
- [ ] updated the **change log**
- [x] ran **pre-commit** checks for code style
- [x] attended to any **TO-DOs** left in the code
Related work items: #2176
## Fixed:
- data manipulation red agent now considers episode reset when calculating next action time
- Moved attack logic out of data manipulation bot `run` method into dedicated `attack` method, because `run` is triggered by episode reset logic. This means the attack no longer always happens at step 1 of every episode.
## Test process
*How have you tested this (if applicable)?*
## Checklist
- [x] PR is linked to a **work item**
- [x] **acceptance criteria** of linked ticket are met
- [x] performed **self-review** of the code
- [ ] written **tests** for any new functionality added with this PR
- [na] updated the **documentation** if this PR changes or adds functionality
- [na] written/updated **design docs** if this PR implements new functionality
- [x] updated the **change log**
- [x] ran **pre-commit** checks for code style
- [x] attended to any **TO-DOs** left in the code
Related work items: #2173
## Summary
Simple change that gives the user an option to turn on/off observation space flattening.
## Test process
Confirmed that if the new setting is set to 'false', SB3 complains about composite spaces, but RL agents notebook works fine.
## Checklist
- [x] PR is linked to a **work item**
- [x] **acceptance criteria** of linked ticket are met
- [x] performed **self-review** of the code
- [ ] written **tests** for any new functionality added with this PR
- [x] updated the **documentation** if this PR changes or adds functionality
- [ ] written/updated **design docs** if this PR implements new functionality
- [x] updated the **change log**
- [x] ran **pre-commit** checks for code style
- [x] attended to any **TO-DOs** left in the code
Make flattening observation spaces optional.
Related work items: #2161
## Summary
Very straightforward change. Just added some config parameters to make pcap and sys logs optional. These options default to false.
## Test process
Verified that both options produce the desired result by running a primaite session with logs enabled and disabled in the config. Unit tests still pass.
## Checklist
- [x] PR is linked to a **work item**
- [x] **acceptance criteria** of linked ticket are met
- [x] performed **self-review** of the code
- [ ] written **tests** for any new functionality added with this PR
- [ ] updated the **documentation** if this PR changes or adds functionality
- [ ] written/updated **design docs** if this PR implements new functionality
- [x] updated the **change log**
- [x] ran **pre-commit** checks for code style
- [x] attended to any **TO-DOs** left in the code
Related work items: #2143, #2154
## Summary
- Replaces Action ID 13 in UC2 with SERVICE.PATCH.
- Fixes issue where `apply_timestep` was not happening at all
- Fixes issue where file actions were not correctly being forwarded
## Test process
Unit tests passing
Running primaite session works without errors
Ran primaite session on UC2 in debug mode and inspected that correct changes are being reflected after actions are applied.
## Checklist
- [x] PR is linked to a **work item**
- [x] **acceptance criteria** of linked ticket are met
- [x] performed **self-review** of the code
- [ ] written **tests** for any new functionality added with this PR
- [ ] updated the **documentation** if this PR changes or adds functionality
- [ ] written/updated **design docs** if this PR implements new functionality
- [ ] updated the **change log**
- [ ] ran **pre-commit** checks for code style
- [ ] attended to any **TO-DOs** left in the code
Related work items: #2143
## Summary
- Added step metadata json file dumps to the environments. Fixed serialization issues in the Switch and ACLRule classes.
## Test process
Nothing outside of a manual inspection for now.
## Checklist
- [ ] PR is linked to a **work item**
- [ ] **acceptance criteria** of linked ticket are met
- [ ] performed **self-review** of the code
- [ ] written **tests** for any new functionality added with this PR
- [ ] updated the **documentation** if this PR changes or adds functionality
- [ ] written/updated **design docs** if this PR implements new functionality
- [ ] updated the **change log**
- [ ] ran **pre-commit** checks for code style
- [ ] attended to any **TO-DOs** left in the code
Related work items: #2085
